Industries · Academic research

Cell-level quantification for research

Cell-level quantification at cohort scale, algorithms co-developed with clinical groups, and research access to Kraken and Nemo — the way we work with UCL, RNOH and Sarcoma UK.

Immune contexture across a tumour bed on H&EImmune contexture across a tumour bed on H&E
What we offer

Ways to work with us

Built on Kraken + Nemo

Cohort quantification

Run a measurement across hundreds or thousands of slides — cellularity, immune density, mitoses, IHC positivity — and export per-cell tables for your statistics.

With your clinical group

Co-developed algorithms

Bring a question and a cohort; we adapt a foundation model to it, validate together and publish together. Our rectal-cancer work with the ARISTOTLE trial started this way.

Kraken · Nemo

Research access to the models

Groups building their own methods can work with the models and the labelled-cell database under a research agreement.

Why it matters

Peer-reviewed publications

Our methods and the products built on them are published, with the cohorts and code they were tested on.

Octopath grew out of a UKRI Future Leaders Fellowship at UCL and works with the Royal National Orthopaedic Hospital and Sarcoma UK. Partner institutions co-author publications and take part in validation.

4
peer-reviewed publications
14
tissue and cancer types
14.1M
labelled cells
9
research collaborations
Process

How a collaboration runs

1

The question

Which cells, which cohort, which outcome.

2

The measurement

Kraken or Nemo adapted and run across the cohort; per-cell tables returned.

3

The analysis

Your statistics on our numbers; our overlays for your figures.

4

The paper

Co-authored, with the algorithm version and validation documented.

Propose a study

Tell us the question and the slide count and we will say what can be measured and how quickly.